Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:29 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for EBSeq on tokay2


To the developers/maintainers of the EBSeq package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/EBSeq.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 561/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EBSeq 1.34.0  (landing page)
Ning Leng
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/EBSeq
git_branch: RELEASE_3_14
git_last_commit: 3398c86
git_last_commit_date: 2021-10-26 12:08:14 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: EBSeq
Version: 1.34.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/EBSeq_1.34.0.tar.gz && rm -rf EBSeq.buildbin-libdir && mkdir EBSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EBSeq.buildbin-libdir EBSeq_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL EBSeq_1.34.0.zip && rm EBSeq_1.34.0.tar.gz EBSeq_1.34.0.zip
StartedAt: 2022-04-12 05:18:57 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 05:20:13 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 76.5 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/EBSeq_1.34.0.tar.gz && rm -rf EBSeq.buildbin-libdir && mkdir EBSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EBSeq.buildbin-libdir EBSeq_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL EBSeq_1.34.0.zip && rm EBSeq_1.34.0.tar.gz EBSeq_1.34.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 19  240k   19 48389    0     0   302k      0 --:--:-- --:--:-- --:--:--  302k
100  240k  100  240k    0     0   346k      0 --:--:-- --:--:-- --:--:--  346k

install for i386

* installing *source* package 'EBSeq' ...
** using staged installation
** R
** data
** demo
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'EBSeq'
    finding HTML links ... done
    DenNHist                                html  
    EBMultiTest                             html  
    EBSeq_NingLeng-package                  html  
    EBTest                                  html  
    GeneMat                                 html  
    GetDEResults                            html  
    GetMultiFC                              html  
    GetMultiPP                              html  
    GetNg                                   html  
    GetNormalizedMat                        html  
    GetPP                                   html  
    GetPPMat                                html  
    GetPatterns                             html  
    IsoList                                 html  
    IsoMultiList                            html  
    Likefun                                 html  
    LikefunMulti                            html  
    LogN                                    html  
    LogNMulti                               html  
    MedianNorm                              html  
    MultiGeneMat                            html  
    PlotPattern                             html  
    PlotPostVsRawFC                         html  
    PolyFitPlot                             html  
    PostFC                                  html  
    QQP                                     html  
    QuantileNorm                            html  
    RankNorm                                html  
    beta.mom                                html  
    crit_fun                                html  
    f0                                      html  
    f1                                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'EBSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'EBSeq' as EBSeq_1.34.0.zip
* DONE (EBSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'EBSeq' successfully unpacked and MD5 sums checked