Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:28 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for DOSE on tokay2


To the developers/maintainers of the DOSE package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/DOSE.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 537/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DOSE 3.20.1  (landing page)
Guangchuang Yu
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/DOSE
git_branch: RELEASE_3_14
git_last_commit: bf434f2
git_last_commit_date: 2021-11-17 04:16:23 -0400 (Wed, 17 Nov 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: DOSE
Version: 3.20.1
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/DOSE_3.20.1.tar.gz && rm -rf DOSE.buildbin-libdir && mkdir DOSE.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DOSE.buildbin-libdir DOSE_3.20.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL DOSE_3.20.1.zip && rm DOSE_3.20.1.tar.gz DOSE_3.20.1.zip
StartedAt: 2022-04-12 05:09:14 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 05:12:10 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 176.2 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/DOSE_3.20.1.tar.gz && rm -rf DOSE.buildbin-libdir && mkdir DOSE.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DOSE.buildbin-libdir DOSE_3.20.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL DOSE_3.20.1.zip && rm DOSE_3.20.1.tar.gz DOSE_3.20.1.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 19 6158k   19 1228k    0     0  1439k      0  0:00:04 --:--:--  0:00:04 1438k
 59 6158k   59 3688k    0     0  1993k      0  0:00:03  0:00:01  0:00:02 1993k
100 6158k  100 6158k    0     0  2379k      0  0:00:02  0:00:02 --:--:-- 2380k

install for i386

* installing *source* package 'DOSE' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'DOSE'
    finding HTML links ... done
    DOSE-package                            html  
    DataSet                                 html  
    EXTID2NAME                              html  
    GSEA_internal                           html  
    clusterSim                              html  
    compareClusterResult-class              html  
    computeIC                               html  
    doSim                                   html  
    enrichDGN                               html  
    enrichDGNv                              html  
    enrichDO                                html  
    enrichNCG                               html  
    enrichResult-class                      html  
    enricher_internal                       html  
    gene2DO                                 html  
    geneID                                  html  
    geneInCategory                          html  
    geneSim                                 html  
    gseDGN                                  html  
    gseDO                                   html  
    gseNCG                                  html  
    gseaResult-class                        html  
    gsfilter                                html  
    mclusterSim                             html  
    parse_ratio                             html  
    rebuildAnnoData                         html  
    reexports                               html  
    setReadable                             html  
    show-methods                            html  
    simplot                                 html  
    summary-methods                         html  
    theme_dose                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'DOSE' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DOSE' as DOSE_3.20.1.zip
* DONE (DOSE)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'DOSE' successfully unpacked and MD5 sums checked