############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/DEP_1.16.0.tar.gz && rm -rf DEP.buildbin-libdir && mkdir DEP.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEP.buildbin-libdir DEP_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL DEP_1.16.0.zip && rm DEP_1.16.0.tar.gz DEP_1.16.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 20 1545k 20 318k 0 0 655k 0 0:00:02 --:--:-- 0:00:02 654k 100 1545k 100 1545k 0 0 1123k 0 0:00:01 0:00:01 --:--:-- 1124k install for i386 * installing *source* package 'DEP' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'DEP' finding HTML links ... done DEP html DiUbi html DiUbi_ExpDesign html LFQ html TMT html UbiLength html UbiLength_ExpDesign html add_rejections html analyze_dep html filter_missval html filter_proteins html get_df_long html get_df_wide html get_prefix html get_results html get_suffix html import_IsobarQuant html import_MaxQuant html impute html make_se html make_se_parse html make_unique html manual_impute html meanSdPlot html normalize_vsn html plot_all html plot_cond html plot_cond_freq html plot_cond_overlap html plot_cor html plot_coverage html plot_detect html plot_dist html plot_frequency html plot_gsea html plot_heatmap html plot_imputation html plot_missval html plot_normalization html plot_numbers html plot_p_hist html plot_pca html plot_single html plot_volcano html process html report html run_app html se2msn html test_diff html test_gsea html theme_DEP1 html theme_DEP2 html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'DEP' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'DEP' as DEP_1.16.0.zip * DONE (DEP) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'DEP' successfully unpacked and MD5 sums checked