Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:05:08 -0400 (Wed, 13 Apr 2022).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the BufferedMatrixMethods package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to [email protected]:packages/BufferedMatrixMethods.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 224/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
BufferedMatrixMethods 1.58.0 (landing page) Ben Bolstad
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: BufferedMatrixMethods |
Version: 1.58.0 |
Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL BufferedMatrixMethods |
StartedAt: 2022-04-12 03:12:03 -0400 (Tue, 12 Apr 2022) |
EndedAt: 2022-04-12 03:12:15 -0400 (Tue, 12 Apr 2022) |
EllapsedTime: 11.6 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL BufferedMatrixMethods ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’ * installing *source* package ‘BufferedMatrixMethods’ ... ** using staged installation ** libs gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/BufferedMatrix/include' -I/usr/local/include -fpic -g -O2 -Wall -c init_package.c -o init_package.o gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.14-bioc/R/library/BufferedMatrix/include' -I/usr/local/include -fpic -g -O2 -Wall -c preprocess_bm.c -o preprocess_bm.o preprocess_bm.c: In function ‘bm_rma_bg_correct’: preprocess_bm.c:344:7: warning: unused variable ‘i’ [-Wunused-variable] 344 | int i,j; | ^ preprocess_bm.c: In function ‘R_bm_rma_bg_correct’: preprocess_bm.c:378:7: warning: unused variable ‘current_mode’ [-Wunused-variable] 378 | int current_mode; | ^~~~~~~~~~~~ preprocess_bm.c: In function ‘R_bm_quantile_normalize’: preprocess_bm.c:593:7: warning: unused variable ‘current_mode’ [-Wunused-variable] 593 | int current_mode; | ^~~~~~~~~~~~ preprocess_bm.c: In function ‘do_RMA_buffmat’: preprocess_bm.c:924:7: warning: variable ‘first_ind’ set but not used [-Wunused-but-set-variable] 924 | int first_ind; | ^~~~~~~~~ preprocess_bm.c: In function ‘R_bm_rma_bg_correct_quantile_normalize’: preprocess_bm.c:1151:7: warning: unused variable ‘current_mode’ [-Wunused-variable] 1151 | int current_mode; | ^~~~~~~~~~~~ At top level: preprocess_bm.c:453:12: warning: ‘min’ defined but not used [-Wunused-function] 453 | static int min(int x1,int x2){ | ^~~ gcc -shared -L/home/biocbuild/bbs-3.14-bioc/R/lib -L/usr/local/lib -o BufferedMatrixMethods.so init_package.o preprocess_bm.o -L/home/biocbuild/bbs-3.14-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.14-bioc/R/library/00LOCK-BufferedMatrixMethods/00new/BufferedMatrixMethods/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BufferedMatrixMethods)