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Package 17/61HostnameOS / ArchBUILDCHECKBUILD BIN
facsDorit 1.4.0
Florian Hahne
Snapshot Date: 2008-10-16 12:02:11 -0700 (Thu, 16 Oct 2008)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/facsDorit
Last Changed Rev: 142 / Revision: 729
Last Changed Date: 2006-09-28 18:17:09 -0700 (Thu, 28 Sep 2006)
lamb1 Linux (SUSE 10.1) / x86_64  OK  WARNINGS 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ WARNINGS ] OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  WARNINGS  OK 
Package: facsDorit
Version: 1.4.0
Command: E:\biocbld\bbs-2.2-bioc\R\bin\R.exe CMD check facsDorit_1.4.0.tar.gz
StartedAt: 2008-10-16 14:22:43 -0700 (Thu, 16 Oct 2008)
EndedAt: 2008-10-16 14:23:41 -0700 (Thu, 16 Oct 2008)
EllapsedTime: 57.5 seconds
RetCode: 0
Status: WARNINGS
CheckDir: facsDorit.Rcheck
Warnings: 1

Command output

* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-data-experiment/meat/facsDorit.Rcheck'
* using R version 2.7.2 (2008-08-25)
* using session charset: ISO8859-1
* checking for file 'facsDorit/DESCRIPTION' ... OK
* this is package 'facsDorit' version '1.4.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'facsDorit' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... WARNING
Found the following file(s) with non-portable file names:
  inst/extdata/map/060304MAPK controls.A01
  inst/extdata/map/060304MAPK controls.A02
  inst/extdata/map/060304MAPK controls.A03
  inst/extdata/map/060304MAPK controls.A04
  inst/extdata/map/060304MAPK controls.A05
  inst/extdata/map/060304MAPK controls.A06
  inst/extdata/map/060304MAPK controls.A07
  inst/extdata/map/060304MAPK controls.A08
  inst/extdata/map/060304MAPK controls.A09
  inst/extdata/map/060304MAPK controls.A10
  inst/extdata/map/060304MAPK controls.A11
  inst/extdata/map/060304MAPK controls.A12
  inst/extdata/map/060304MAPK controls.B01
  inst/extdata/map/060304MAPK controls.B02
  inst/extdata/map/060304MAPK controls.B03
  inst/extdata/map/060304MAPK controls.B04
  inst/extdata/map/060304MAPK controls.B05
  inst/extdata/map/060304MAPK controls.B06
  inst/extdata/map/060304MAPK controls.B07
  inst/extdata/map/060304MAPK controls.B08
  inst/extdata/map/060304MAPK controls.B09
  inst/extdata/map/060304MAPK controls.B10
  inst/extdata/map/060304MAPK controls.B11
  inst/extdata/map/060304MAPK controls.B12
  inst/extdata/map/060304MAPK controls.C01
  inst/extdata/map/060304MAPK controls.C02
  inst/extdata/map/060304MAPK controls.C03
  inst/extdata/map/060304MAPK controls.C04
  inst/extdata/map/060304MAPK controls.C05
  inst/extdata/map/060304MAPK controls.C06
  inst/extdata/map/060304MAPK controls.C07
  inst/extdata/map/060304MAPK controls.C08
  inst/extdata/map/060304MAPK controls.C09
  inst/extdata/map/060304MAPK controls.C10
  inst/extdata/map/060304MAPK controls.C11
  inst/extdata/map/060304MAPK controls.C12
  inst/extdata/map/060304MAPK controls.D01
  inst/extdata/map/060304MAPK controls.D02
  inst/extdata/map/060304MAPK controls.D03
  inst/extdata/map/060304MAPK controls.D04
  inst/extdata/map/060304MAPK controls.D05
  inst/extdata/map/060304MAPK controls.D06
  inst/extdata/map/060304MAPK controls.D07
  inst/extdata/map/060304MAPK controls.D08
  inst/extdata/map/060304MAPK controls.D09
  inst/extdata/map/060304MAPK controls.D10
  inst/extdata/map/060304MAPK controls.D11
  inst/extdata/map/060304MAPK controls.D12
  inst/extdata/map/060304MAPK controls.E01
  inst/extdata/map/060304MAPK controls.E02
  inst/extdata/map/060304MAPK controls.E03
  inst/extdata/map/060304MAPK controls.E04
  inst/extdata/map/060304MAPK controls.E05
  inst/extdata/map/060304MAPK controls.E06
  inst/extdata/map/060304MAPK controls.E07
  inst/extdata/map/060304MAPK controls.E08
  inst/extdata/map/060304MAPK controls.E09
  inst/extdata/map/060304MAPK controls.E10
  inst/extdata/map/060304MAPK controls.E11
  inst/extdata/map/060304MAPK controls.E12
  inst/extdata/map/060304MAPK controls.F01
  inst/extdata/map/060304MAPK controls.F02
  inst/extdata/map/060304MAPK controls.F03
  inst/extdata/map/060304MAPK controls.F04
  inst/extdata/map/060304MAPK controls.F05
  inst/extdata/map/060304MAPK controls.F06
  inst/extdata/map/060304MAPK controls.F07
  inst/extdata/map/060304MAPK controls.F08
  inst/extdata/map/060304MAPK controls.F09
  inst/extdata/map/060304MAPK controls.F10
  inst/extdata/map/060304MAPK controls.F11
  inst/extdata/map/060304MAPK controls.F12
  inst/extdata/map/060304MAPK controls.G01
  inst/extdata/map/060304MAPK controls.G02
  inst/extdata/map/060304MAPK controls.G03
  inst/extdata/map/060304MAPK controls.G04
  inst/extdata/map/060304MAPK controls.G05
  inst/extdata/map/060304MAPK controls.G06
  inst/extdata/map/060304MAPK controls.G07
  inst/extdata/map/060304MAPK controls.G08
  inst/extdata/map/060304MAPK controls.G09
  inst/extdata/map/060304MAPK controls.G10
  inst/extdata/map/060304MAPK controls.G11
  inst/extdata/map/060304MAPK controls.G12
  inst/extdata/map/060304MAPK controls.H01
  inst/extdata/map/060304MAPK controls.H02
  inst/extdata/map/060304MAPK controls.H03
  inst/extdata/map/060304MAPK controls.H04
  inst/extdata/map/060304MAPK controls.H05
  inst/extdata/map/060304MAPK controls.H06
  inst/extdata/map/060304MAPK controls.H07
  inst/extdata/map/060304MAPK controls.H08
  inst/extdata/map/060304MAPK controls.H09
  inst/extdata/map/060304MAPK controls.H10
  inst/extdata/map/060304MAPK controls.H11
  inst/extdata/map/060304MAPK controls.H12
These are not fully portable file names
See section 'Package structure' in manual 'Writing R Extensions'.
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating facsDorit-Ex.R ... OK
* checking examples ... OK
* creating facsDorit-manual.tex ... OK
* checking facsDorit-manual.tex using pdflatex ... OK

WARNING: There was 1 warning, see
  E:/biocbld/bbs-2.2-data-experiment/meat/facsDorit.Rcheck/00check.log
for details

facsDorit.Rcheck/00install.out:

installing R.css in E:/biocbld/bbs-2.2-data-experiment/meat/facsDorit.Rcheck


---------- Making package facsDorit ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
Note: ignoring empty \keyword entries
Note: removing empty section \references
Note: ignoring empty \keyword entries
Note: removing empty section \references
 >>> Building/Updating help pages for package 'facsDorit'
     Formats: text html latex example chm 
  facsDorit                         text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.2-data-experiment\meat\facsDorit.Rcheck\00_pkg_src\facsDorit\chm\facsDorit.chm


Compile time: 0 minutes, 0 seconds
2	Topics
2	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.2-data-experiment\meat\facsDorit.Rcheck\00_pkg_src\facsDorit\chm\facsDorit.chm, 16,450 bytes
Compression increased file by 8,849 bytes.
  adding MD5 sums

* DONE (facsDorit)