Package: CLL

Version: 1.2.4

Command: /Library/Frameworks/R.framework/Versions/2.7/Resources/bin/R CMD check CLL_1.2.4.tar.gz

StartedAt: 2008-10-16 13:29:32 -0700 (Thu, 16 Oct 2008)

EndedAt: 2008-10-16 13:31:46 -0700 (Thu, 16 Oct 2008)

EllapsedTime: 134.4 seconds

RetCode: 0

Status: OK

CheckDir: CLL.Rcheck

Warnings: 0

* checking for working pdflatex ... OK
* using log directory '/Users/biocbuild/bbs-2.2-data-experiment/meat/CLL.Rcheck'
* using R version 2.7.2 (2008-08-25)
* using session charset: ASCII
* checking for file 'CLL/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'CLL' version '1.2.4'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'CLL' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating CLL-Ex.R ... OK
* checking examples ... OK
* creating CLL-manual.tex ... OK
* checking CLL-manual.tex using pdflatex ... OK

* Installing *source* package 'CLL' ...
** R
** data
** help
 >>> Building/Updating help pages for package 'CLL'
     Formats: text html latex example 
  CLL-package                       text    html    latex   example
  CLLbatch                          text    html    latex   example
  disease                           text    html    latex   example
  nsFilter                          text    html    latex   example
  sCLLex                            text    html    latex   example
  sFiltert                          text    html    latex   example
  sFiltertBH                        text    html    latex   example
** building package indices ...
* DONE (CLL)