Back to the "Multiple platform build/check report"[A] B  C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

Package 17/260HostnameOS / ArchBUILDCHECKBUILD BIN
altcdfenvs 2.2.0
Laurent Gautier
Snapshot Date: 2008-08-08 00:12:03 -0700 (Fri, 08 Aug 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_2/madman/Rpacks/altcdfenvs
Last Changed Rev: 31430 / Revision: 33132
Last Changed Date: 2008-04-29 16:50:18 -0700 (Tue, 29 Apr 2008)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  WARNINGS [ OK ]
Package: altcdfenvs
Version: 2.2.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh altcdfenvs_2.2.0.tar.gz /Library/Frameworks/R.framework/Versions/2.7/Resources/bin/R altcdfenvs.buildbin-libdir
StartedAt: 2008-08-08 06:45:32 -0700 (Fri, 08 Aug 2008)
EndedAt: 2008-08-08 06:45:41 -0700 (Fri, 08 Aug 2008)
EllapsedTime: 9.3 seconds
RetCode: 0
Status: OK
PackageFile: altcdfenvs_2.2.0.tgz
PackageFileSize: 348.8 KiB

Command output

                INSTALLATION WITH 'R CMD INSTALL altcdfenvs_2.2.0.tar.gz'

* Installing to library 'altcdfenvs.buildbin-libdir'
* Installing *source* package 'altcdfenvs' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affy
Loading required package: affyio
Loading required package: preprocessCore
Loading required package: matchprobes
Loading required package: makecdfenv
Loading required package: Biostrings
Loading required package: hypergraph
Loading required package: graph

Attaching package: 'graph'


	The following object(s) are masked from package:Biostrings :

	 complement 


Attaching package: 'hypergraph'


	The following object(s) are masked from package:Biostrings :

	 head,
	 tail 


	The following object(s) are masked from package:utils :

	 head,
	 tail 

NOTE: arguments in definition for validity method for class 'AffyProbesMatch' changed from (obj) to (object)
Warning in matchSignature(signature, fdef, where) :
  in the method signature for function "toHypergraph" no definition for class: "CdfEnvAffy"
Creating a new generic function for "plot" in "altcdfenvs"
** help
Note: removing empty section \details
Note: removing empty section \examples
Note: removing empty section \details
Note: removing empty section \section{Warning}
Note: removing empty section \examples
Note: removing empty section \note
Note: removing empty section \value
 >>> Building/Updating help pages for package 'altcdfenvs'
     Formats: text html latex example 
  AffyProbesMatch-class             text    html    latex   example
  CdfEnvAffy-class                  text    html    latex   example
  appendCdfEnvAffy                  text    html    latex   example
  buildCdfEnv.biostrings            text    html    latex
  cdfenv                            text    html    latex   example
  cdfenvEx                          text    html    latex   example
  copyCdfEnvAffy                    text    html    latex
  countduplicated                   text    html    latex
  geneNames                         text    html    latex
  getxy.probeseq                    text    html    latex   example
  index2xy                          text    html    latex   example
  indexProbes.CdfEnvAffy            text    html    latex
  matchAffyProbes                   text    html    latex   example
  plot.CdfEnvAffy                   text    html    latex   example
  removeIndex                       text    html    latex   example
  toHypergraph                      text    html    latex
  unique.CdfEnvAffy                 text    html    latex   example
  utils.FASTA                       text    html    latex   example
  validAffyBatch                    text    html    latex   example
** building package indices ...
* DONE (altcdfenvs)