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Package 184/264HostnameOS / ArchBUILDCHECKBUILD BIN
plw 0.99.6
Magnus Astrand
Snapshot Date: 2008-04-09 00:13:10 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/plw
Last Changed Rev: 30083 / Revision: 30951
Last Changed Date: 2008-02-21 11:09:48 -0800 (Thu, 21 Feb 2008)
lamb1 Linux (SUSE 10.1) / x86_64 [ ERROR ] skipped 
wilson2 Linux (openSUSE 10.3) / x86_64  ERROR  skipped 
wellington Linux (openSUSE 10.3) / i686  ERROR  skipped 
liverpool Windows Server 2003 R2 (32-bit) / x64  ERROR  skipped  skipped 
pelham Mac OS X Leopard (10.5.1) / i386  ERROR  skipped  skipped 
Package: plw
Version: 0.99.6
Command: /home/biocbuild/bbs-2.2-bioc/R/bin/R CMD build plw
StartedAt: 2008-04-09 03:22:14 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 03:22:20 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 5.5 seconds
RetCode: 1
Status: ERROR
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'plw/DESCRIPTION' ... OK
* preparing 'plw':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'plw' ...
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c SpecialFunctions.c -o SpecialFunctions.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.2-bioc/R/include -I/home/biocbuild/bbs-2.2-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c SpecialOptim.c -o SpecialOptim.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o plw.so SpecialFunctions.o SpecialOptim.o   -L/home/biocbuild/bbs-2.2-bioc/R/lib -lR
** R
** data
** inst
** preparing package for lazy loading
Loading required package: MASS
Loading required package: affy
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affyio
Loading required package: preprocessCore
Loading required package: splines
** help
 >>> Building/Updating help pages for package 'plw'
     Formats: text html latex example 
  AffySpikeU95Subset                text    html    latex
  HowToPLW                          text    html    latex   example
  estimateMVbeta                    text    html    latex
  estimateSigma                     text    html    latex
  estimateSigmaMV                   text    html    latex
  estimateSigmaMVbeta               text    html    latex
  getKnots                          text    html    latex
  lmw                               text    html    latex   example
  logitT                            text    html    latex   example
  plw-package                       text    html    latex
  plw                               text    html    latex   example
  scaleParameterPlot                text    html    latex   example
  statByIndex                       text    html    latex   example
  topRankSummary                    text    html    latex   example
  varHistPlot                       text    html    latex   example
** building package indices ...
* DONE (plw)
* creating vignettes ... ERROR
Loading required package: plw
Loading required package: MASS
Loading required package: affy
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affyio
Loading required package: preprocessCore
Loading required package: splines
Error: no function to return from, jumping to top level
Execution halted