PROcess 1.15.0
Xiaochun Li
| Snapshot Date: 2008-04-09 00:13:10 -0700 (Wed, 09 Apr 2008) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/PROcess | | Last Changed Rev: 30639 / Revision: 30951 | | Last Changed Date: 2008-03-24 10:46:05 -0700 (Mon, 24 Mar 2008) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | WARNINGS | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | WARNINGS | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | WARNINGS | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ WARNINGS ] | OK |
| pelham | Mac OS X Leopard (10.5.1) / i386 | OK | WARNINGS | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/PROcess.Rcheck'
* using R version 2.7.0 Under development (unstable) (2008-03-10 r44730)
* using session charset: ISO8859-1
* checking for file 'PROcess/DESCRIPTION' ... OK
* this is package 'PROcess' version '1.15.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'PROcess' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... WARNING
Found the following file(s) with non-portable file names:
inst/calibration/060503peptidecalib 1_128.csv
inst/calibration/060503peptidecalib 1_16.csv
inst/calibration/060503peptidecalib 1_2.csv
inst/calibration/060503peptidecalib 1_256.csv
inst/calibration/060503peptidecalib 1_32.csv
inst/calibration/060503peptidecalib 1_4.csv
inst/calibration/060503peptidecalib 1_64.csv
inst/calibration/060503peptidecalib 1_8.csv
inst/Test/122402imac40-s-c-192combined i11.csv
inst/Test/122402imac40-s-c-192combined i12.csv
These are not fully portable file names
See section 'Package structure' in manual 'Writing R Extensions'.
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating PROcess-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating PROcess-manual.tex ... OK
* checking PROcess-manual.tex using pdflatex ... OK
WARNING: There was 1 warning, see
E:/biocbld/bbs-2.2-bioc/meat/PROcess.Rcheck/00check.log
for details
installing R.css in E:/biocbld/bbs-2.2-bioc/meat/PROcess.Rcheck
---------- Making package PROcess ------------
adding build stamp to DESCRIPTION
installing NAMESPACE file and metadata
installing R files
installing inst files
preparing package PROcess for lazy loading
Loading required package: Icens
Loading required package: survival
Loading required package: splines
installing man source files
installing indices
installing help
>>> Building/Updating help pages for package 'PROcess'
Formats: text html latex example chm
align text html latex chm
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getMzs text html latex chm
getPeaks text html latex example chm
getPeaks2 text html latex chm
intg text html latex example chm
is.multiple text html latex example chm
isPeak text html latex example chm
lnn text html latex chm
peaks text html latex example chm
pk2bmkr text html latex example chm
quality text html latex example chm
read.files text html latex chm
renorm text html latex example chm
rmBaseline text html latex example chm
specZoom text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.2-bioc\meat\PROcess.Rcheck\00_pkg_src\PROcess\chm\PROcess.chm
Compile time: 0 minutes, 0 seconds
21 Topics
47 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.2-bioc\meat\PROcess.Rcheck\00_pkg_src\PROcess\chm\PROcess.chm, 33,806 bytes
Compression decreased file by 17,668 bytes.
adding MD5 sums
* DONE (PROcess)