rHVDM 1.5.0
Martino Barenco
| Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/rHVDM | | Last Changed Rev: 27716 / Revision: 29143 | | Last Changed Date: 2007-10-02 18:16:39 -0700 (Tue, 02 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | OK | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | OK | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | [ OK ] | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | OK | OK |
* checking for working latex ... OK
* using log directory '/loc/home/biocbuild/bbs-2.2-bioc/meat/rHVDM.Rcheck'
* using R version 2.7.0 Under development (unstable) (2007-12-09 r43632)
* checking for file 'rHVDM/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'rHVDM' version '1.5.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'rHVDM' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating rHVDM-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... NOTE
--- running texi2dvi on vignettes
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './rHVDM.tex' ...
Package natbib Warning: Citation `HVDM' on page 1 undefined on input line 43.
Package natbib Warning: Citation `HVDM' on page 4 undefined on input line 91.
Package natbib Warning: Citation `HVDM' on page 4 undefined on input line 115.
Package natbib Warning: Citation `biocond' on page 4 undefined on input line 11
Package natbib Warning: Citation `R2HTML' on page 4 undefined on input line 115
Package natbib Warning: Citation `rescale' on page 5 undefined on input line 12
Package natbib Warning: Citation `HVDM' on page 6 undefined on input line 147.
Package natbib Warning: Citation `err1' on page 6 undefined on input line 147.
Package natbib Warning: Citation `err2' on page 6 undefined on input line 147.
Package natbib Warning: Citation `err3' on page 6 undefined on input line 147.
Package natbib Warning: Citation `HVDM' on page 11 undefined on input line 312.
Package natbib Warning: Citation `HVDM' on page 12 undefined on input line 347.
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './rHVDM.tex' ...
Package natbib Warning: Citation `HVDM' on page 1 undefined on input line 43.
Package natbib Warning: Citation `HVDM' on page 4 undefined on input line 91.
Package natbib Warning: Citation `HVDM' on page 5 undefined on input line 115.
Package natbib Warning: Citation `biocond' on page 5 undefined on input line 11
Package natbib Warning: Citation `R2HTML' on page 5 undefined on input line 115
Package natbib Warning: Citation `rescale' on page 5 undefined on input line 12
Package natbib Warning: Citation `HVDM' on page 6 undefined on input line 147.
Package natbib Warning: Citation `err1' on page 6 undefined on input line 147.
Package natbib Warning: Citation `err2' on page 6 undefined on input line 147.
Package natbib Warning: Citation `err3' on page 6 undefined on input line 147.
Package natbib Warning: Citation `HVDM' on page 12 undefined on input line 312.
Package natbib Warning: Citation `HVDM' on page 13 undefined on input line 347.
/usr/bin/texi2dvi: Running pdflatex --file-line-error </dev/null '\nonstopmode' '\input' './rHVDM.tex' ...
* creating rHVDM-manual.tex ... OK
* checking rHVDM-manual.tex ... OK
/loc/home/biocbuild/bbs-2.2-bioc/meat/rHVDM.Rcheck
* Installing *source* package 'rHVDM' ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: R2HTML
Loading required package: affy
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: affyio
Loading required package: preprocessCore
Loading required package: minpack.lm
** help
>>> Building/Updating help pages for package 'rHVDM'
Formats: text html latex example
HVDMcheck text html latex example
HVDMreport text html latex example
fitgene text html latex example
fiveGyMAS5 text html latex
genestoscreen text html latex
p53traingenes text html latex
screening text html latex example
training text html latex example
** building package indices ...
* DONE (rHVDM)