maanova 1.7.1
Hyuna Yang
| Snapshot Date: 2007-12-11 00:09:07 -0800 (Tue, 11 Dec 2007) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/maanova | | Last Changed Rev: 27736 / Revision: 29143 | | Last Changed Date: 2007-10-03 15:14:01 -0700 (Wed, 03 Oct 2007) |
| lamb1 | Linux (SUSE 10.1) / x86_64 | OK | WARNINGS | |
| wilson2 | Linux (openSUSE 10.3) / x86_64 | OK | WARNINGS | |
| wellington | Linux (openSUSE 10.3) / i686 | OK | WARNINGS | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ WARNINGS ] | OK |
| lemming | Windows Server 2003 (32-bit) / x64 | OK | WARNINGS | OK |
* checking for working latex ... OK
* using log directory 'E:/biocbld/bbs-2.2-bioc/meat/maanova.Rcheck'
* using R version 2.7.0 Under development (unstable) (2007-11-14 r43455)
* checking for file 'maanova/DESCRIPTION' ... OK
* this is package 'maanova' version '1.7.1'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'maanova' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... WARNING
'library' or 'require' calls not declared from:
snow
See the information on DESCRIPTION files in the chapter 'Creating R
packages' of the 'Writing R Extensions' manual.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
matest: no visible global function definition for 'makeMPIcluster'
matest: no visible global function definition for 'clusterApply'
matest: no visible global function definition for 'clusterEvalQ'
matest: no visible global function definition for 'stopCluster'
matest.engine: multiple local function definitions for 'ttest' with
different formal arguments
matest.perm: no visible binding for global variable 'random'
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating maanova-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating maanova-manual.tex ... OK
* checking maanova-manual.tex ... OK
WARNING: There was 1 warning, see
E:/biocbld/bbs-2.2-bioc/meat/maanova.Rcheck/00check.log
for details
installing R.css in E:/biocbld/bbs-2.2-bioc/meat/maanova.Rcheck
---------- Making package maanova ------------
adding build stamp to DESCRIPTION
making DLL ...
making makeratio.d from makeratio.c
making masvd.d from masvd.c
making shift.d from shift.c
making util.d from util.c
gcc-sjlj -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c makeratio.c -o makeratio.o
gcc-sjlj -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c masvd.c -o masvd.o
masvd.c:114:2: warning: "/*" within comment
masvd.c:154:1: warning: "/*" within comment
masvd.c:161:5: warning: "/*" within comment
masvd.c:165:2: warning: "/*" within comment
masvd.c:189:2: warning: "/*" within comment
gcc-sjlj -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c shift.c -o shift.o
shift.c: In function 'shift':
shift.c:27: warning: unused variable 'k'
gcc-sjlj -std=gnu99 -Ie:/biocbld/bbs-2.2-bioc/R/include -O3 -Wall -c util.c -o util.o
windres --preprocessor="gcc-sjlj -E -xc -DRC_INVOKED" -I e:/biocbld/bbs-2.2-bioc/R/include -i maanova_res.rc -o maanova_res.o
gcc-sjlj -std=gnu99 -shared -s -o maanova.dll maanova.def makeratio.o masvd.o shift.o util.o maanova_res.o -Le:/biocbld/bbs-2.2-bioc/R/bin -Le:/biocbld/bbs-2.2-bioc/R/bin -lRlapack -lR
... DLL made
installing DLL
installing R files
installing demos
installing inst files
installing data files
preparing package maanova for lazy loading
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'maanova'
Formats: text html latex example chm
PairContrast text html latex example chm
Rmaanova.version text html latex example chm
abf1 text html latex example chm
adjPval text html latex example chm
arrayview text html latex example chm
consensus text html latex example chm
dyeswapfilter text html latex example chm
fill.missing text html latex example chm
fitmaanova text html latex example chm
fom text html latex example chm
geneprofile text html latex example chm
gridcheck text html latex example chm
kidney text html latex example chm
maanova-internal text html latex example chm
macluster text html latex example chm
matest text html latex example chm
read.madata text html latex example chm
resiplot text html latex example chm
riplot text html latex example chm
subset.madata text html latex example chm
summarytable text html latex example chm
transform.madata text html latex example chm
varplot text html latex example chm
volcano text html latex example chm
write.madata text html latex example chm
Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.2-bioc\meat\maanova.Rcheck\00_pkg_src\maanova\chm\maanova.chm
Compile time: 0 minutes, 0 seconds
26 Topics
76 Local links
0 Internet links
1 Graphic
Created e:\biocbld\bbs-2.2-bioc\meat\maanova.Rcheck\00_pkg_src\maanova\chm\maanova.chm, 69,726 bytes
Compression decreased file by 59,476 bytes.
adding MD5 sums
* DONE (maanova)