BioC experimental data: CHECK report for bladderbatch on moscato2

Package: bladderbatch

Version: 1.0.5

Command: rm -rf bladderbatch.buildbin-libdir && mkdir bladderbatch.buildbin-libdir && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=bladderbatch.buildbin-libdir bladderbatch_1.0.5.tar.gz >bladderbatch-install.out 2>&1 && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD check --library=bladderbatch.buildbin-libdir --install="check:bladderbatch-install.out" --force-multiarch --no-vignettes --timings bladderbatch_1.0.5.tar.gz && mv bladderbatch.buildbin-libdir/* bladderbatch.Rcheck/ && rmdir bladderbatch.buildbin-libdir

StartedAt: 2013-10-08 12:56:06 -0700 (Tue, 08 Oct 2013)

EndedAt: 2013-10-08 12:59:13 -0700 (Tue, 08 Oct 2013)

EllapsedTime: 186.4 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: bladderbatch.Rcheck

Warnings: 1

* using log directory 'E:/biocbld/bbs-2.12-data-experiment/meat/bladderbatch.Rcheck'
* using R version 3.0.1 (2013-05-16)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'bladderbatch/DESCRIPTION' ... OK
* this is package 'bladderbatch' version '1.0.5'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'bladderbatch' can be installed ... OK
* checking installed package size ... NOTE
  installed size is  9.3Mb
  sub-directories of 1Mb or more:
    data   9.1Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                  old_size new_size compress
  bladderdata.rda    9.1Mb    8.1Mb       xz
* checking installed files from 'inst/doc' ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

WARNING: There was 1 warning.
NOTE: There was 1 note.
See
  'E:/biocbld/bbs-2.12-data-experiment/meat/bladderbatch.Rcheck/00check.log'
for details.

install for i386

* installing *source* package 'bladderbatch' ...
** data
** inst
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'bladderbatch' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'bladderbatch' as bladderbatch_1.0.5.zip
* DONE (bladderbatch)