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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1
Package 67/247HostnameOSArchBUILDCHECKBUILD BIN

ecolitk

1.9.0

Laurent
Last Changed Date: 2007-04-24 11:31:42 -0700
Last Changed Rev: 24217
lamb1 Linux (SUSE 10.1) x86_64 [ ERROR ]skipped
wellington Linux (SUSE 9.2) i686  ERROR skipped
liverpool Windows Server 2003 R2 (32-bit) x64  ERROR skippedskipped
pitt Mac OS X (10.4.10) i386  ERROR skippedskipped
Package: ecolitk
Version: 1.9.0
Command: /home/biocbuild/bbs-2.1-bioc/R/bin/R CMD build ecolitk
RetCode: 1
Time: 23.5 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'ecolitk/DESCRIPTION' ... OK
* preparing 'ecolitk':
* checking DESCRIPTION meta-information ... OK
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
* Installing *source* package 'ecolitk' ...
** R
** data
** inst
** help
Note: unmatched right brace in 'linkedmultiget' on or after line 6
Note: unmatched right brace in 'wstringapply' on or after line 6
 >>> Building/Updating help pages for package 'ecolitk'
     Formats: text html latex example 
  ecoli.data                        text    html    latex   example
  ecoligenome.operon                text    html    latex   example
  ecoligenomeBNUM                   text    html    latex
  ecoligenomeBNUM2MULTIFUN          text    html    latex
  gccontent                         text    html    latex
  linkedmultiget                    text    html    latex   example
  multiFun                          text    html    latex   example
  pointsCircle                      text    html    latex   example
  polar2xy                          text    html    latex   example
  polygonChrom                      text    html    latex   example
  wstringapply                      text    html    latex   example
** building package indices ...
* DONE (ecolitk)
* creating vignettes ... ERROR
Loading required package: affy
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affyio
Loading required package: preprocessCore
Loading required package: ecoliLeucine
Loading required package: ecolicdf

Error: processing vignette 'ecolitk.Rnw' failed with diagnostics:
 chunk 16 
Error in err(isConflict[!isNull]) : 
  assayData element dimnames conflict: se.exprs, exprs
In addition: Warning messages:
1: '\.' is an unrecognized escape in a character string 
2: unrecognized escape removed from "^1\\\.6" 
Execution halted