BioC 2.1: CHECK report for RWebServices on lamb1

* checking for working latex ... OK
* using log directory '/home/biocbuild/bbs-2.1-bioc/meat/RWebServices.Rcheck'
* using R version 2.6.0 Under development (unstable) (2007-08-06 r42439)
* checking for file 'RWebServices/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'RWebServices' version '1.1.2'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'RWebServices' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating RWebServices-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating RWebServices-manual.tex ... OK
* checking RWebServices-manual.tex ... OK

* Installing *source* package 'RWebServices' ...

Guessing SJava home: /home/biocbuild/bbs-2.1-bioc/meat/RWebServices.Rcheck/SJava

configure: creating ./config.status
config.status: creating inst/scripts/RWebServicesEnv.properties
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c init.c -o init.o
gcc -std=gnu99 -I/home/biocbuild/bbs-2.1-bioc/R/include -I/home/biocbuild/bbs-2.1-bioc/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c RWebServicesConverters.c -o RWebServicesConverters.o
gcc -std=gnu99 -shared -L/usr/local/lib64 -o RWebServices.so init.o RWebServicesConverters.o   -L/home/biocbuild/bbs-2.1-bioc/R/lib -lR
** R
** inst
** preparing package for lazy loading
Loading required package: SJava
Loading required package: TypeInfo
Loading required package: tools
** help
 >>> Building/Updating help pages for package 'RWebServices'
     Formats: text html latex example 
  ArrayAndMatrix-class              text    html    latex   example
  RJavaPkgFunctions-class           text    html    latex   example
  RJavaSignature-class              text    html    latex   example
  RWebServices.package              text    html    latex   example
  SinkOutput-class                  text    html    latex   example
  converters                        text    html    latex   example
  createMap                         text    html    latex   example
  generateDataMap                   text    html    latex   example
  generateDataTest                  text    html    latex   example
  generateFunctionMap               text    html    latex   example
  importDataCvt                     text    html    latex   example
  printLookup                       text    html    latex   example
  sinkSetup                         text    html    latex   example
  testUtils                         text    html    latex   example
  typeInfo2Java                     text    html    latex   example
  unpackAntScript                   text    html    latex   example
** building package indices ...
* DONE (RWebServices)

Package 209/247	Hostname	OS	Arch	BUILD	CHECK	BUILD BIN
RWebServices 1.1.2 Biocore Team c/o BioC user list Last Changed Date: 2007-08-20 09:33:20 -0700 Last Changed Rev: 26527	lamb1	Linux (SUSE 10.1)	x86_64	OK	[ OK ]
	wellington	Linux (SUSE 9.2)	i686	OK	OK
	liverpool	Windows Server 2003 R2 (32-bit)	x64	ERROR	skipped	skipped
	pitt	Mac OS X (10.4.10)	i386	ERROR	skipped	skipped

RWebServices

1.1.2

Command output