seqcombo

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see seqcombo.

Visualization Tool for Sequence Recombination and Reassortment

Bioconductor version: 3.9

Provides useful functions for visualizing sequence recombination and virus reassortment events.

Author: Guangchuang Yu [aut, cre]

Maintainer: Guangchuang Yu <guangchuangyu at gmail.com>

Citation (from within R, enter citation("seqcombo")):

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("seqcombo")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("seqcombo")

biocViews	Alignment, Software, Visualization
Version	1.6.0
In Bioconductor since	BioC 3.6 (R-3.4) (6.5 years)
License	Artistic-2.0
Depends	R (>= 3.4.0)
Imports	Biostrings, cowplot, dplyr, ggplot2, grid, igraph, magrittr, methods, rvcheck, utils
System Requirements
URL
Bug Reports	https://github.com/GuangchuangYu/seqcombo/issues

Suggests	emojifont, knitr, prettydoc, tibble
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Follow Installation instructions to use this package in your R session.

Source Package	seqcombo_1.6.0.tar.gz
Windows Binary	seqcombo_1.6.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	seqcombo_1.6.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/seqcombo
Source Repository (Developer Access)	git clone [email protected]:packages/seqcombo
Bioc Package Browser	https://code.bioconductor.org/browse/seqcombo/
Package Short Url	https://bioconductor.org/packages/seqcombo/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.9	Source Archive