Rcpi
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see Rcpi.
Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery
Bioconductor version: 3.9
Rcpi offers a molecular informatics toolkit with a comprehensive integration of bioinformatics and chemoinformatics tools for drug discovery.
Author: Nan Xiao [aut, cre], Dong-Sheng Cao [aut], Qing-Song Xu [aut]
Maintainer: Nan Xiao <me at nanx.me>
Citation (from within R, enter
citation("Rcpi")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Rcpi")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Rcpi")| Rcpi Quick Reference Card | HTML | |
| Rcpi: R/Bioconductor Package as an Integrated Informatics Platform for Drug Discovery | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | BiomedicalInformatics, Cheminformatics, DataImport, DataRepresentation, FeatureExtraction, GO, Proteomics, Software, SystemsBiology |
| Version | 1.20.1 |
| In Bioconductor since | BioC 2.14 (R-3.1) (10 years) |
| License | Artistic-2.0 | file LICENSE |
| Depends | R (>= 3.0.2) |
| Imports | stats, utils, methods, RCurl, rjson, foreach, doParallel, Biostrings, GOSemSim, ChemmineR, fmcsR, rcdk (>= 3.3.8) |
| System Requirements | |
| URL | https://nanx.me/Rcpi/ https://github.com/nanxstats/Rcpi |
| Bug Reports | https://github.com/nanxstats/Rcpi/issues |
See More
| Suggests | knitr, rmarkdown, RUnit, BiocGenerics |
| Linking To | |
| Enhances | ChemmineOB |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | Rcpi_1.20.1.tar.gz |
| Windows Binary | Rcpi_1.20.1.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | Rcpi_1.20.1.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/Rcpi |
| Source Repository (Developer Access) | git clone [email protected]:packages/Rcpi |
| Bioc Package Browser | https://code.bioconductor.org/browse/Rcpi/ |
| Package Short Url | https://bioconductor.org/packages/Rcpi/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |