REBET
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see REBET.
The subREgion-based BurdEn Test (REBET)
Bioconductor version: 3.9
There is an increasing focus to investigate the association between rare variants and diseases. The REBET package implements the subREgion-based BurdEn Test which is a powerful burden test that simultaneously identifies susceptibility loci and sub-regions.
Author: Bill Wheeler [cre], Bin Zhu [aut], Lisa Mirabello [ctb], Nilanjan Chatterjee [ctb]
Maintainer: Bill Wheeler <wheelerb at imsweb.com>
citation("REBET")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("REBET")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("REBET")| REBET Vignette | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | SNP, Software, VariantAnnotation |
| Version | 1.2.0 |
| In Bioconductor since | BioC 3.8 (R-3.5) (5.5 years) |
| License | GPL-2 |
| Depends | ASSET |
| Imports | stats, utils |
| System Requirements | |
| URL |
See More
| Suggests | RUnit, BiocGenerics |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | REBET_1.2.0.tar.gz |
| Windows Binary | REBET_1.2.0.zip |
| Mac OS X 10.11 (El Capitan) | REBET_1.2.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/REBET |
| Source Repository (Developer Access) | git clone [email protected]:packages/REBET |
| Bioc Package Browser | https://code.bioconductor.org/browse/REBET/ |
| Package Short Url | https://bioconductor.org/packages/REBET/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |