QUALIFIER
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see QUALIFIER.
Quality Control of Gated Flow Cytometry Experiments
Bioconductor version: 3.9
Provides quality control and quality assessment tools for gated flow cytometry data.
Author: Mike Jiang,Greg Finak,Raphael Gottardo
Maintainer: Mike Jiang <wjiang2 at fhcrc.org>
Citation (from within R, enter
citation("QUALIFIER")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("QUALIFIER")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("QUALIFIER")| Quick plot for cytometry data | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | CellBasedAssays, FlowCytometry, ImmunoOncology, Infrastructure, Software |
| Version | 1.28.0 |
| In Bioconductor since | BioC 2.10 (R-2.15) (12 years) |
| License | Artistic-2.0 |
| Depends | R (>= 2.14.0), flowCore, flowViz, ncdfFlow, flowWorkspace, data.table, reshape |
| Imports | MASS, hwriter, lattice, stats4, flowCore, flowViz, methods, flowWorkspace, latticeExtra, grDevices, tools, Biobase, XML, grid |
| System Requirements | |
| URL |
See More
| Suggests | RSVGTipsDevice, knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | QUALIFIER_1.28.0.tar.gz |
| Windows Binary | QUALIFIER_1.28.0.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | QUALIFIER_1.28.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/QUALIFIER |
| Source Repository (Developer Access) | git clone [email protected]:packages/QUALIFIER |
| Bioc Package Browser | https://code.bioconductor.org/browse/QUALIFIER/ |
| Package Short Url | https://bioconductor.org/packages/QUALIFIER/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |