MCRestimate
This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see MCRestimate.
Misclassification error estimation with cross-validation
Bioconductor version: 3.9
This package includes a function for combining preprocessing and classification methods to calculate misclassification errors
Author: Marc Johannes, Markus Ruschhaupt, Holger Froehlich, Ulrich Mansmann, Andreas Buness, Patrick Warnat, Wolfgang Huber, Axel Benner, Tim Beissbarth
Maintainer: Marc Johannes <m.johannes at dkfz.de>
citation("MCRestimate")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MCRestimate")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MCRestimate")| HOW TO use MCRestimate | R Script | |
| Reference Manual |
Details
| biocViews | Classification, Software |
| Version | 2.40.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 19 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.7.2), golubEsets(>= 1.4.6) |
| Imports | e1071 (>= 1.5-12), pamr (>= 1.22), randomForest (>= 3.9-6), RColorBrewer (>= 0.1-3), Biobase(>= 2.5.5), graphics, grDevices, stats, utils |
| System Requirements | |
| URL |
See More
| Suggests | xtable (>= 1.2-1), ROC(>= 1.8.0), genefilter(>= 1.12.0), gpls(>= 1.6.0) |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | MCRestimate_2.40.0.tar.gz |
| Windows Binary | MCRestimate_2.40.0.zip |
| Mac OS X 10.11 (El Capitan) | MCRestimate_2.40.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/MCRestimate |
| Source Repository (Developer Access) | git clone [email protected]:packages/MCRestimate |
| Bioc Package Browser | https://code.bioconductor.org/browse/MCRestimate/ |
| Package Short Url | https://bioconductor.org/packages/MCRestimate/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |