ISoLDE
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see ISoLDE.
Integrative Statistics of alleLe Dependent Expression
Bioconductor version: 3.9
This package provides ISoLDE a new method for identifying imprinted genes. This method is dedicated to data arising from RNA sequencing technologies. The ISoLDE package implements original statistical methodology described in the publication below.
Author: Christelle Reynès [aut, cre], Marine Rohmer [aut], Guilhem Kister [aut]
Maintainer: Christelle Reynès <christelle.reynes at igf.cnrs.fr>
citation("ISoLDE")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ISoLDE")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual | |
| README | Text |
| NEWS | Text |
Details
| biocViews | Epigenetics, GeneExpression, GeneRegulation, GeneSetEnrichment, GeneticVariability, Genetics, ImmunoOncology, MathematicalBiology, MultipleComparison, RNASeq, SNP, Sequencing, Software, Transcription |
| Version | 1.12.0 |
| In Bioconductor since | BioC 3.3 (R-3.3) (8 years) |
| License | GPL (>= 2.0) |
| Depends | R (>= 3.3.0), graphics, grDevices, stats, utils |
| Imports | |
| System Requirements | |
| URL | www.r-project.org |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | ISoLDE_1.12.0.tar.gz |
| Windows Binary | ISoLDE_1.12.0.zip |
| Mac OS X 10.11 (El Capitan) | ISoLDE_1.12.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/ISoLDE |
| Source Repository (Developer Access) | git clone [email protected]:packages/ISoLDE |
| Bioc Package Browser | https://code.bioconductor.org/browse/ISoLDE/ |
| Package Short Url | https://bioconductor.org/packages/ISoLDE/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |