HELP
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see HELP.
Tools for HELP data analysis
Bioconductor version: 3.9
The package contains a modular pipeline for analysis of HELP microarray data, and includes graphical and mathematical tools with more general applications.
Author: Reid F. Thompson <reid.thompson at gmail.com>, John M. Greally <john.greally at einstein.yu.edu>, with contributions from Mark Reimers <mreimers at vcu.edu>
Maintainer: Reid F. Thompson <reid.thompson at gmail.com>
citation("HELP")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("HELP")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("HELP")| 1. Primer | R Script | |
| Reference Manual |
Details
| biocViews | CpGIsland, DNAMethylation, DataImport, Microarray, Preprocessing, QualityControl, Software, TwoChannel, Visualization |
| Version | 1.42.0 |
| In Bioconductor since | BioC 2.3 (R-2.8) (15.5 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.8.0), stats, graphics, grDevices, Biobase, methods |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | HELP_1.42.0.tar.gz |
| Windows Binary | HELP_1.42.0.zip |
| Mac OS X 10.11 (El Capitan) | HELP_1.42.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/HELP |
| Source Repository (Developer Access) | git clone [email protected]:packages/HELP |
| Bioc Package Browser | https://code.bioconductor.org/browse/HELP/ |
| Package Short Url | https://bioconductor.org/packages/HELP/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |