GraphAlignment
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see GraphAlignment.
GraphAlignment
Bioconductor version: 3.9
Graph alignment is an extension package for the R programming environment which provides functions for finding an alignment between two networks based on link and node similarity scores. (J. Berg and M. Laessig, "Cross-species analysis of biological networks by Bayesian alignment", PNAS 103 (29), 10967-10972 (2006))
Author: Joern P. Meier <mail at ionflux.org>, Michal Kolar, Ville Mustonen, Michael Laessig, and Johannes Berg.
Maintainer: Joern P. Meier <mail at ionflux.org>
citation("GraphAlignment")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GraphAlignment")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("GraphAlignment")| GraphAlignment | R Script | |
| Reference Manual | ||
| LICENSE | Text |
Details
| biocViews | GraphAndNetwork, Network, Software |
| Version | 1.48.0 |
| In Bioconductor since | BioC 2.2 (R-2.7) (16 years) |
| License | file LICENSE |
| Depends | |
| Imports | |
| System Requirements | |
| URL | http://www.thp.uni-koeln.de/~berg/GraphAlignment/ |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | GraphAlignment_1.48.0.tar.gz |
| Windows Binary | GraphAlignment_1.48.0.zip |
| Mac OS X 10.11 (El Capitan) | GraphAlignment_1.48.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/GraphAlignment |
| Source Repository (Developer Access) | git clone [email protected]:packages/GraphAlignment |
| Bioc Package Browser | https://code.bioconductor.org/browse/GraphAlignment/ |
| Package Short Url | https://bioconductor.org/packages/GraphAlignment/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |