BLMA
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see BLMA.
BLMA: A package for bi-level meta-analysis
Bioconductor version: 3.9
Suit of tools for bi-level meta-analysis. The package can be used in a wide range of applications, including general hypothesis testings, differential expression analysis, functional analysis, and pathway analysis.
Author: Tin Nguyen <tin at wayne.edu> and Sorin Draghici <sorin at wayne.edu>
Maintainer: Tin Nguyen <tin at wayne.edu>
citation("BLMA")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BLMA")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BLMA")| BLMA | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | DifferentialExpression, GeneSetEnrichment, Microarray, Pathways, Software |
| Version | 1.8.0 |
| In Bioconductor since | BioC 3.5 (R-3.4) (7 years) |
| License | GPL (>=2) |
| Depends | ROntoTools, GSA, PADOG, limma, graph, stats, utils, parallel, Biobase |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | RUnit, BiocGenerics |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | multiHiCcompare |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BLMA_1.8.0.tar.gz |
| Windows Binary | BLMA_1.8.0.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | BLMA_1.8.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/BLMA |
| Source Repository (Developer Access) | git clone [email protected]:packages/BLMA |
| Bioc Package Browser | https://code.bioconductor.org/browse/BLMA/ |
| Package Short Url | https://bioconductor.org/packages/BLMA/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |