SPEM
This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see SPEM.
S-system parameter estimation method
Bioconductor version: 3.10
This package can optimize the parameter in S-system models given time series data
Author: Xinyi YANG Developer, Jennifer E. DENT Developer and Christine NARDINI Supervisor
Maintainer: Xinyi YANG <yangxinyi at picb.ac.cn>
Citation (from within R, enter
citation("SPEM")
):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("SPEM")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SPEM")
Vignette for SPEM | R Script | |
Reference Manual | ||
NEWS | Text |
Details
biocViews | Network, NetworkInference, Software |
Version | 1.26.0 |
In Bioconductor since | BioC 2.12 (R-3.0) (11 years) |
License | GPL-2 |
Depends | R (>= 2.15.1), Rsolnp, Biobase, methods |
Imports | |
System Requirements | |
URL |
See More
Suggests | |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | TMixClust |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | SPEM_1.26.0.tar.gz |
Windows Binary | SPEM_1.26.0.zip |
Mac OS X 10.11 (El Capitan) | SPEM_1.26.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/SPEM |
Source Repository (Developer Access) | git clone [email protected]:packages/SPEM |
Bioc Package Browser | https://code.bioconductor.org/browse/SPEM/ |
Package Short Url | https://bioconductor.org/packages/SPEM/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.10 | Source Archive |