SPEM

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see SPEM.

S-system parameter estimation method


Bioconductor version: 3.10

This package can optimize the parameter in S-system models given time series data

Author: Xinyi YANG Developer, Jennifer E. DENT Developer and Christine NARDINI Supervisor

Maintainer: Xinyi YANG <yangxinyi at picb.ac.cn>

Citation (from within R, enter citation("SPEM")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SPEM")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SPEM")
Vignette for SPEM PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews Network, NetworkInference, Software
Version 1.26.0
In Bioconductor since BioC 2.12 (R-3.0) (11 years)
License GPL-2
Depends R (>= 2.15.1), Rsolnp, Biobase, methods
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me TMixClust
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SPEM_1.26.0.tar.gz
Windows Binary SPEM_1.26.0.zip
Mac OS X 10.11 (El Capitan) SPEM_1.26.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/SPEM
Source Repository (Developer Access) git clone [email protected]:packages/SPEM
Bioc Package Browser https://code.bioconductor.org/browse/SPEM/
Package Short Url https://bioconductor.org/packages/SPEM/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.10 Source Archive